Penicillin is a drug that belongs to the beta-lactam class of antibiotics, a group characterized by a distinctive four-membered nitrogen-containing ring structure. This antibiotic functions by interfering with a fundamental biological process unique to bacteria, resulting in their death.
The Essential Target: Peptidoglycan
Bacterial survival relies heavily on a robust outer casing known as the cell wall, which is composed of a mesh-like polymer called peptidoglycan. This macromolecule encases the bacterial cell membrane, providing mechanical strength and protection against high internal osmotic pressure. Without this rigid structural support, the bacteria would absorb water, swell, and burst.
The peptidoglycan structure consists of long glycan strands made of alternating sugar molecules, which are cross-linked by short peptide chains to create a strong, three-dimensional latticework. The formation of these cross-links is catalyzed by a group of enzymes called transpeptidases, which are also known by the collective term Penicillin-Binding Proteins (PBPs). These enzymes are responsible for the final, stabilizing step in cell wall construction, making them a point of vulnerability for the bacterial cell.
The Killing Mechanism: Inhibiting Construction
The unique structure of the penicillin molecule is key to its lethal action. The beta-lactam ring closely mimics the shape of the D-alanyl-D-alanine peptide terminus, the natural substrate for the transpeptidase enzyme. This molecular mimicry allows penicillin to trick the PBP into binding to the drug instead of the peptide chains. Once bound, the drug’s strained beta-lactam ring breaks open, forming an irreversible covalent bond with an active-site serine residue within the transpeptidase enzyme.
This permanent attachment effectively inactivates the transpeptidase, preventing the final cross-linking reaction of the peptidoglycan strands. With the PBPs chemically blocked, the bacterial cell cannot complete the assembly of a new, functional cell wall. As the cell attempts to grow and divide, it uses existing wall-degrading enzymes to remodel the structure, but it cannot repair the resulting gaps. The resulting structurally unsound wall can no longer withstand the cell’s internal osmotic pressure, causing the cell membrane to rupture and leading to osmotic lysis.
Selective Toxicity: Why Humans Are Safe
The effectiveness of penicillin is rooted in the principle of selective toxicity, meaning it targets structures present only in the pathogen. The mechanism of action focuses entirely on disrupting the synthesis of peptidoglycan, the unique component of the bacterial cell wall. Peptidoglycan and the transpeptidase enzymes required for its synthesis are entirely absent in human cells.
Human cells, which are eukaryotic, possess a different structural organization and do not rely on an external cell wall. Since penicillin has no molecular target in the human body, it does not interfere with human cell functions. This fundamental biological difference allows the drug to selectively kill the bacteria without causing significant harm to the patient.
The Counterattack: How Bacteria Become Resistant
After decades of use, bacteria have evolved defenses against penicillin, leading to drug resistance. One primary mechanism involves the production of enzymes called Beta-lactamases (penicillinases), which directly attack and neutralize the antibiotic. These bacterial enzymes hydrolyze the amide bond within the beta-lactam ring of the penicillin molecule, opening the ring structure. Once the ring is opened, the molecule can no longer mimic the transpeptidase substrate, rendering the drug inactive.
A second major mechanism of resistance is the modification of the drug’s target, the Penicillin-Binding Protein itself. Bacteria acquire mutations in the genes that code for their PBPs, resulting in a protein that has an altered three-dimensional shape. This structural change reduces the binding affinity between the penicillin molecule and the PBP active site. Because the drug cannot bind effectively to the modified PBP, the transpeptidase enzyme remains functional, allowing the bacteria to continue synthesizing a strong cell wall.

