Blood cultures are a laboratory test used to detect the presence of microorganisms circulating in a patient’s bloodstream, a condition known as bacteremia. Blood cultures are performed when a bloodstream infection is suspected, particularly in cases that may progress to sepsis. Identifying the specific organism is a time-sensitive step because it directly influences the choice of antibiotic therapy, which significantly affects patient outcomes. Since different microbes have distinct survival needs, the process involves culturing the blood sample in two different environments to ensure the widest possible range of infectious agents can be captured and grown.
Understanding Oxygen Requirements
The necessity of using two separate culture bottles stems from the fundamental biological differences in how microorganisms interact with oxygen. Microbes are generally categorized into three main groups based on their oxygen needs for growth and metabolism. These differences dictate whether a pathogen will thrive in an aerobic environment, which contains oxygen, or an anaerobic environment, which is oxygen-free.
Obligate aerobes are organisms that must have oxygen to survive and reproduce, as they rely on aerobic respiration to generate energy. Conversely, obligate anaerobes are poisoned by the presence of oxygen and can only grow in environments where it is completely absent. This toxicity is often due to their lack of enzymes that detoxify the reactive oxygen species produced during metabolic processes.
The third and most commonly encountered group in blood cultures is the facultative anaerobes, which have metabolic flexibility. These microbes can use oxygen for efficient energy production when it is available, but they are also capable of switching to an anaerobic form of metabolism, such as fermentation, when oxygen levels are low or depleted. Facultative anaerobes typically grow best in the presence of oxygen, but their ability to survive in both conditions makes them adaptable pathogens.
The Blood Culture Collection Procedure
The collection of a blood culture set is a technique-sensitive procedure, as proper execution directly impacts result accuracy. A standard set requires drawing blood into two separate bottles, one designed to promote aerobic growth and the other to support anaerobic growth, from a single venipuncture site. The most important factor influencing detection is the volume of blood collected, with an optimal amount of 8 to 10 milliliters per bottle for adult patients.
To avoid false-positive results, meticulous skin preparation at the venipuncture site is performed using an antiseptic solution like chlorhexidine, scrubbed for approximately 30 seconds and then allowed to air dry completely for at least 30 seconds. This process reduces the number of normal skin microbes that could contaminate the sample. The blood is then drawn using a sterile collection system.
The order in which the bottles are filled is a standardized procedure, with the aerobic bottle receiving the blood first. This sequence is important because the tubing used in the collection system, such as a butterfly needle, may trap a small amount of atmospheric air. Filling the aerobic bottle first vents this trapped air, preventing the accidental introduction of oxygen into the anaerobic bottle, which could inhibit the growth of oxygen-sensitive organisms. After collection, the bottles are transported to the laboratory and placed into automated monitoring systems that continuously check for microbial growth.
Identifying Specific Pathogens
The two culture bottles are designed to recover distinct populations of infectious agents, which guides clinical decision-making. The aerobic bottle is the most frequently positive culture, designed to capture obligate aerobes and the highly common facultative anaerobes. Pathogens commonly recovered here include Staphylococcus aureus, Escherichia coli, and Pseudomonas aeruginosa, which are frequent causes of bloodstream infections.
The anaerobic bottle specifically targets obligate anaerobes such as Bacteroides fragilis and Clostridium species, which are typically associated with infections originating from deep tissue, the gastrointestinal tract, or areas with poor blood flow. While these obligate anaerobes account for a small percentage of overall positive blood cultures, they are often linked to severe, polymicrobial infections with high mortality.
Despite their name, anaerobic bottles also frequently grow facultative anaerobes, sometimes exclusively, because the oxygen-reduced environment can be more conducive to their growth than the aerobic bottle in certain circumstances. Studies have shown that a significant percentage of clinically relevant organisms, including E. coli and S. aureus, are recovered only in the anaerobic bottle.

