Klebsiella pneumoniae is a Gram-negative, rod-shaped bacterium and an opportunistic pathogen frequently implicated in healthcare-acquired infections. This organism often possesses a thick, mucoid polysaccharide capsule. It is a common cause of serious conditions such as pneumonia and urinary tract infections (UTIs), especially in hospitalized or immunocompromised individuals. Since visual examination alone cannot distinguish this bacterium from many others, accurate identification is essential for effective clinical management and appropriate treatment selection. Biochemical testing analyzes the organism’s unique metabolic capabilities, serving as the definitive method for its identification.
Why Laboratory Identification is Essential
Klebsiella pneumoniae belongs to the family Enterobacteriaceae, which includes many other common pathogens such as Escherichia coli and various Enterobacter species. These organisms share a similar Gram-negative, rod-shaped appearance under a microscope, making simple visual inspection unreliable for diagnosis. Identification relies on understanding the unique metabolic pathways of the isolate, which dictate how it processes nutrients and what waste products it produces. Biochemical tests are designed to exploit these differences, providing a metabolic fingerprint for the organism.
The misidentification of K. pneumoniae can lead to severe consequences, notably the inappropriate use of antibiotics. This bacterium is often naturally resistant to certain antibiotics, such as ampicillin, and frequently acquires resistance mechanisms, including extended-spectrum beta-lactamases (ESBLs). If a less resistant organism is suspected, the initial treatment may fail, delaying effective therapy and contributing to antibiotic resistance. Therefore, laboratory confirmation of the species is necessary before targeted treatment can begin.
The IMViC Test Series for Differentiation
The IMViC test series is a foundational set of four biochemical reactions used to differentiate members of the Enterobacteriaceae family based on their metabolic end products. This series includes the Indole, Methyl Red, Voges-Proskauer, and Citrate utilization tests. For K. pneumoniae, the expected result profile is negative, negative, positive, positive (I-/M-/V+/C+). This unique signature helps microbiologists distinguish it from its closest relatives.
The Indole test determines the organism’s ability to break down the amino acid tryptophan into indole using the enzyme tryptophanase. A positive result is indicated by a red ring forming after the addition of Kovac’s reagent. K. pneumoniae typically lacks this enzyme, producing a negative result where no indole is formed and the reagent layer remains yellow. This negative result is a significant marker, especially when differentiating it from Klebsiella oxytoca, which is usually indole-positive.
The Methyl Red (MR) and Voges-Proskauer (VP) tests are often performed concurrently. The MR test assesses the organism’s capacity to perform mixed-acid fermentation of glucose, producing stable acids that lower the pH. K. pneumoniae is usually MR-negative, meaning it does not produce enough stable acid to cause the methyl red indicator to turn red.
Conversely, the Voges-Proskauer test detects organisms that utilize the butanediol pathway for glucose fermentation, producing neutral end products, specifically acetoin. K. pneumoniae is VP-positive, indicating that it converts pyruvate into acetoin, which is then detected by the addition of specific reagents, resulting in a distinct red color. The inverse relationship between the MR-negative and VP-positive results is highly characteristic of Klebsiella species.
The final test, Citrate utilization, examines the bacterium’s ability to use citrate as its sole source of carbon for growth. This requires the organism to possess the enzyme citrate permease. Since K. pneumoniae is capable of this metabolic feat, the test produces a positive result. The utilization of citrate releases alkaline byproducts, raising the pH of the medium and causing the bromothymol blue indicator to shift the medium color from green to a deep blue.
Additional Biochemical Markers
Other biochemical tests are necessary to confirm the identity of K. pneumoniae and distinguish it from closely related species. The Urease activity test determines the presence of the enzyme urease, which hydrolyzes urea into ammonia and carbon dioxide. The resulting ammonia raises the pH of the medium, causing a phenol red indicator to change from yellow to bright pink. K. pneumoniae is typically a strong urease-positive organism, producing this color change rapidly, which is a useful characteristic for its identification.
Motility testing involves stabbing the bacterium into a semi-solid agar medium and observing the growth pattern. K. pneumoniae is a non-motile bacterium because it lacks flagella. A negative result is indicated by growth confined strictly to the line of inoculation, providing a clear distinction from motile members of the Enterobacteriaceae family, such as E. coli.
Lactose fermentation is a significant metabolic marker for K. pneumoniae. When tested on Triple Sugar Iron (TSI) agar, which contains lactose, sucrose, and a small amount of glucose, K. pneumoniae exhibits strong fermentative capability. The rapid fermentation of lactose produces a large amount of acid, resulting in a yellow color throughout the medium (acid/acid), often accompanied by gas production. This strong lactose fermentation characteristic helps to separate it from non-lactose fermenting pathogens, finalizing the biochemical identification process.

