Gonorrhea is a common sexually transmitted infection caused by the bacterium Neisseria gonorrhoeae, with over 82 million new cases reported globally in 2020. Untreated, this infection can lead to serious health complications, including pelvic inflammatory disease in women and infertility in both sexes. Control relies primarily on antibiotic treatment, but the bacteria’s ability to evolve requires regular changes to recommended drugs. Ciprofloxacin, often known as Cipro, was once a standard treatment option. Due to microbial evolution and resistance, this drug is no longer widely used to treat gonorrhea.
How Ciprofloxacin Works Against Bacteria
Ciprofloxacin belongs to the fluoroquinolone class of antibiotics. Its effectiveness against N. gonorrhoeae stems from its ability to disrupt the bacteria’s genetic machinery. The drug targets two specific bacterial enzymes, DNA gyrase and topoisomerase IV, which are necessary for DNA replication, repair, and transcription.
DNA gyrase is considered the primary target for Ciprofloxacin in N. gonorrhoeae. By binding to these enzymes, the antibiotic enhances the cleavage of bacterial DNA strands, shattering the cell’s genetic code. This mechanism prevents the bacteria from successfully dividing and replicating, ultimately leading to cell death.
The Development of Resistance in Gonorrhea
Ciprofloxacin was introduced as a frontline treatment for gonorrheal infections in the early 1990s. Cases of decreased susceptibility and clinical failures were soon reported, driven primarily by genetic changes known as point mutations within the bacterial genome.
Resistance emerged through mutations in the quinolone resistance determining region (QRDR) of the gyrA and parC genes. These genes encode the targeted enzymes. Mutations in these regions change the enzyme structure, preventing Ciprofloxacin from binding effectively and rendering the drug inactive.
Quinolone-Resistant N. gonorrhoeae (QRNG) first became a major problem in Asia in the early 1990s and subsequently spread globally. Resistance rates in the U.S. jumped from 0.7% of isolates in 2001 to 13.3% by 2011. Due to these high levels of treatment failure, the Centers for Disease Control and Prevention (CDC) removed Ciprofloxacin from its recommended treatment guidelines in 2006 and 2007.
Current Recommended Treatment Protocols
The failure of Ciprofloxacin necessitated a shift to other classes of antibiotics, leading to current treatment protocols. For uncomplicated urogenital, anorectal, and pharyngeal gonorrhea, the CDC currently recommends a single, intramuscular dose of ceftriaxone. This third-generation cephalosporin remains highly effective against N. gonorrhoeae.
The standard dose of ceftriaxone is 500 mg for most patients, or 1 gram for individuals weighing 150 kg or more. This single-drug therapy replaced the previous dual-therapy recommendation, which included azithromycin, to promote better antimicrobial stewardship.
If a co-infection with Chlamydia trachomatis has not been excluded, a concurrent course of oral doxycycline is recommended. Doxycycline is taken twice daily for seven days to treat the potential chlamydia infection. If ceftriaxone cannot be used due to a severe cephalosporin allergy, an alternative regimen involves an injection of gentamicin combined with a high oral dose of azithromycin.
Monitoring and Combating Antibiotic Resistance
The history of resistance to drugs like Ciprofloxacin highlights the ongoing public health threat posed by N. gonorrhoeae. To track emerging resistance patterns, the United States relies on the Gonococcal Isolate Surveillance Project (GISP), established in 1986. This sentinel surveillance system collects and tests samples of N. gonorrhoeae from various clinics to determine their susceptibility to current antibiotics.
Data collected by GISP are regularly analyzed and directly inform the CDC’s treatment guidelines, ensuring that current therapies remain effective against circulating strains. This surveillance detected the initial decline in Ciprofloxacin’s efficacy and now monitors the susceptibility of ceftriaxone, which is the last remaining effective class of antibiotics for first-line treatment.
Antibiotic-resistant gonorrhea is currently categorized as an urgent threat by the CDC, prompting aggressive action to ensure treatment options remain viable. This includes efforts to develop new antimicrobial agents to replenish the drug pipeline, given the bacteria’s capacity to evolve. Furthermore, research into non-antibiotic prevention methods, such as vaccines, is underway to secure long-term control over this infection.

