A sore throat is a common symptom of COVID-19, leading many people to wonder about the specific effect the SARS-CoV-2 virus has on the tonsils. The tonsils are masses of lymphatic tissue situated at the back of the throat, designed to intercept pathogens entering the respiratory system. While COVID-19 is a respiratory virus that primarily targets the upper airway, its interaction with this immune tissue can result in varying degrees of discomfort and visible inflammation. This article explores the direct connection between the virus and tonsillar tissue, how this presentation differs from other illnesses, and ways to manage the associated pain.
The Role of Tonsils in Respiratory Immunity
The tonsils, specifically the palatine tonsils, are part of the body’s comprehensive lymphatic system, forming a ring of tissue at the entrance of the digestive and respiratory tracts. They function as immunological sentinels, acting as a first line of defense against inhaled or ingested bacteria and viruses. This tissue contains specialized immune cells, including B cells and T cells, which are constantly sampling the microorganisms that pass through the throat.
When a pathogen like SARS-CoV-2 is detected, the tonsils initiate a localized immune response, which often causes them to swell. This enlargement, known as tonsillitis, is a sign that the immune system is actively fighting an infection. The increased size results from the rapid proliferation and activation of white blood cells within the tonsil’s germinal centers.
COVID-19 Manifestation in Tonsil and Throat Tissue
The SARS-CoV-2 virus directly affects the throat and tonsils because the cells in the upper respiratory tract express high levels of the Angiotensin-Converting Enzyme 2 (ACE2) receptor. This ACE2 receptor acts as the primary doorway the virus uses to enter and infect human cells. Since the throat is one of the initial points of contact for the virus, inflammation (pharyngitis) and tonsil involvement are common symptoms of COVID-19 infection.
A sore throat is one of the most frequently reported symptoms, particularly with newer variants like Omicron, where it can be described as sharp or severely painful. This increased prevalence is attributed to the virus’s evolution, which favors replication in the upper airway compared to earlier strains.
While tonsil swelling (tonsillitis) can occur with COVID-19, it is generally less severe than the inflammation seen in certain bacterial infections. Crucially, the presence of specific tonsillar exudates—white patches or pus streaks—is rare in COVID-19. The typical presentation is a red, irritated throat and tonsils, often accompanied by other general respiratory symptoms.
Differentiating COVID-19 from Other Tonsil-Related Illnesses
Distinguishing a COVID-19 sore throat from other common infections that affect the tonsils is difficult, as many symptoms overlap. The two most common alternative causes of severe tonsil-related symptoms are bacterial Strep throat and Mononucleosis (Mono), typically caused by the Epstein-Barr virus. The appearance of the tonsils can offer important clues for differentiation.
Strep throat is characterized by a rapid onset of severe throat pain, a high fever, and the presence of white patches or pus (exudate) directly on the tonsils. Unlike COVID-19, Strep throat typically does not cause a cough or a runny nose. The bacterial nature of Strep means it requires antibiotic treatment to prevent complications.
Mononucleosis, another viral infection, can cause severe tonsillitis, often resulting in swollen tonsils that may also be covered with pus-like white patches. Mono is also associated with prolonged fatigue and notably swollen lymph nodes in the neck. While COVID-19 can cause swollen tonsils and fatigue, the presence of exudate and the lack of a cough are key clinical differentiators for Strep or Mono. Determining the exact cause requires a specific diagnostic test, such as a rapid Strep test or a COVID-19 test.
Managing Throat and Tonsil Discomfort During Infection
Managing the throat and tonsil discomfort associated with a COVID-19 infection involves reducing inflammation and pain while supporting recovery. Over-the-counter pain relievers, such as acetaminophen or nonsteroidal anti-inflammatory drugs (NSAIDs) like ibuprofen, can help manage the pain and reduce throat inflammation. These medications are effective for systemic relief, especially when the pain is severe.
Home remedies provide localized comfort and can be used alongside medication to soothe irritated tissue. Gargling with warm salt water is an effective method to reduce throat swelling and irritation. Using throat lozenges, especially those containing menthol, can create a temporary numbing effect that dulls the pain. Maintaining hydration with both warm fluids like tea and cold liquids such as water or ice chips helps to keep the throat moist and provide relief.
A sore throat requires medical evaluation beyond simple symptom management if the pain is severe or if symptoms suggest a bacterial infection, such as white patches on the tonsils. Seeking a medical consultation is warranted in these cases. Additionally, any sign of severe breathing difficulty or inability to swallow liquids should prompt immediate emergency care.

