Biochemical tests are foundational tools in the clinical microbiology laboratory for identifying bacterial species. These tests look for the presence or absence of specific metabolic capabilities within an organism, providing a biochemical fingerprint that helps distinguish one microbe from another. Accurate identification is paramount, especially in cases of gastroenteritis, where swift and precise diagnosis of the causative agent directly impacts patient care and public health management. Among these diagnostic procedures, the Indole test is a straightforward technique used primarily for differentiating members of the Enterobacteriaceae family, a large group of Gram-negative bacteria that includes many enteric pathogens.
Biochemical Principle of Indole Production
The Indole test checks for a bacterium’s ability to metabolize a specific amino acid found in protein sources. The target substrate is L-tryptophan, an alpha-amino acid commonly present in peptones used in growth media. Bacteria that possess the necessary enzyme system can degrade this molecule, leading to the production of three distinct end products.
The reaction is catalyzed by the intracellular enzyme tryptophanase, which facilitates the hydrolysis of L-tryptophan. This degradation involves a reductive deamination step where the amino group is removed from the tryptophan molecule. The coenzyme pyridoxal phosphate is required for tryptophanase activity, ensuring the reaction proceeds efficiently.
The action of tryptophanase results in the cleavage of L-tryptophan, yielding indole, pyruvic acid, and ammonia (ammonium ions). Indole is an aromatic, heterocyclic organic compound that accumulates in the bacterial growth medium.
Indole is the specific chemical marker the test detects, confirming the functional presence of the tryptophanase enzyme system within the tested organism.
The Indole test is a direct measure of an organism’s genetic capability to express this enzyme. If the enzyme is present and active, indole is produced; otherwise, the substrate remains untouched. The subsequent steps of the procedure focus on making the invisible indole product visible through a chemical reaction.
Indole Reaction Profiles of Shigella
Shigella is a genus of non-motile, non-lactose fermenting, Gram-negative rod-shaped bacteria that are highly adapted human pathogens. They are the causative agents of shigellosis, often characterized by bacillary dysentery. The genus is divided into four main species: S. dysenteriae, S. flexneri, S. boydii, and S. sonnei.
In the context of the Indole test, Shigella species are typically characterized as Indole-negative. The consistent Indole-negative profile in Shigella sonnei is particularly reliable for identification purposes.
The inability to produce indole stems from genetic changes that prevent the synthesis of the tryptophanase enzyme. The loss of this metabolic function is a distinguishing feature of the genus.
While the Indole reaction is not universally negative across all serotypes, certain serotypes of S. flexneri and S. dysenteriae may exhibit a positive or variable reaction. Despite these rare exceptions, the vast majority of clinically significant Shigella isolates confirm the expected negative result, reinforcing the test’s utility.
Methodology and Interpretation of the Test
Performing the Indole test typically involves a conventional tube method that requires growing the bacterial sample in a liquid medium rich in L-tryptophan. Tryptone broth is the medium of choice because it provides a high concentration of the necessary amino acid substrate. A small sample of the pure bacterial culture is inoculated into the broth, which is then incubated for a period generally ranging from 24 to 48 hours at 35 to 37 degrees Celsius.
This incubation time allows the inoculated bacteria to grow and, if they possess the tryptophanase enzyme, to produce and accumulate indole in the medium. After the incubation period, a specific detection reagent is added to the surface of the broth to chemically react with any indole that may be present. The most widely used reagent for this procedure is Kovac’s reagent.
Kovac’s reagent is a solution containing para-dimethylaminobenzaldehyde (DMAB), concentrated hydrochloric acid, and isoamyl alcohol. When added, the isoamyl alcohol component of the reagent rises to the top, forming a distinct layer. Indole, if present in the broth, is extracted into this alcohol layer.
The detection step occurs when the indole reacts with the DMAB in the acidic environment of the reagent. This chemical reaction forms a red-colored compound known as rosindole dye. A positive result is visually identified by the appearance of a bright cherry-red ring at the interface between the reagent layer and the broth within seconds of adding the reagent.
Conversely, a negative result is indicated by the absence of the red color, with the reagent layer remaining the original yellow or light brown color of Kovac’s reagent. An orange color may occasionally develop, which can be an intermediate result. A variation of this procedure uses Ehrlich’s reagent, which substitutes isoamyl alcohol with ethyl alcohol and is often considered more sensitive for detecting weak indole producers or when testing non-fermenting organisms.
Common procedural errors that can lead to false results include using a medium that does not contain sufficient tryptophan or taking an inoculum from an agar plate that contains dyes, which can interfere with the final color reaction. Ensuring proper incubation time and temperature is also important, as insufficient growth may prevent even a positive organism from producing enough indole for detection.
Application in Enteric Pathogen Identification
The Indole test is an essential component in the initial steps of identifying and classifying Gram-negative enteric bacteria. It is frequently employed as one of the four tests in the IMViC series, a biochemical battery used to distinguish among members of the Enterobacteriaceae family. The test’s primary utility in clinical settings is to help differentiate Shigella from closely related organisms.
The clear distinction the test provides is between the typically Indole-negative Shigella species and the majority of Escherichia coli strains, which are characteristically Indole-positive. This single reaction provides a rapid and cost-effective means of narrowing down the diagnostic possibilities for a diarrheal illness. The Indole test is interpreted alongside other biochemical indicators, such as tests for motility, citrate utilization, and lactose fermentation.
For instance, a non-motile, non-lactose fermenting, Indole-negative organism points strongly toward a Shigella identification. However, an organism that is motile, ferments lactose, and is Indole-positive is highly suggestive of E. coli. The combined results from these simple biochemical reactions build a comprehensive metabolic profile that guides the microbiologist toward a final, accurate identification.

