What Are the Base Pairing Rules for DNA?

Deoxyribonucleic acid, or DNA, carries the instructions required for development, survival, and reproduction. This hereditary material is structured as a double helix, a twisted ladder shape, built from repeating units called nucleotides. The information within this structure is encoded by a sequence of four specific chemical units: Adenine (A), Thymine (T), Cytosine (C), and Guanine (G). The precise arrangement and pairing of these four letters form the genetic code that defines every organism.

Defining the Four Nucleobases

The four chemical letters that make up the DNA code are formally known as nitrogenous nucleobases. These bases are chemically categorized into two distinct groups based on their molecular structure. Adenine (A) and Guanine (G) are classified as purines, characterized by a larger, double-ring structure. The other two bases, Thymine (T) and Cytosine (C), are pyrimidines, recognizable by their smaller, single-ring structure. The consistent pairing of one large purine with one small pyrimidine gives the DNA double helix its uniform, ladder-like width.

The Rule of Complementary Pairing

The structure of the DNA double helix is maintained by complementary pairing between the two strands. Adenine (A) always pairs with Thymine (T), and Guanine (G) always pairs with Cytosine (C). This mandatory pairing is stabilized by weak attractions called hydrogen bonds that form between the paired bases. The A-T pair is held together by two hydrogen bonds, while the C-G pair is held together by three. This difference means that C-G rich regions of DNA are more stable and require more energy to separate than A-T rich regions.

How Pairing Enables DNA Replication

The complementary nature of the base pairing provides the mechanism for copying the genetic material, a process known as DNA replication. Before a cell divides, the two strands of the double helix unwind and separate, acting like a zipper opening up the ladder. Each original strand then serves as a template for the synthesis of a new partner strand. Free-floating nucleotides are attracted to the exposed bases according to the A-T and C-G pairing rules, and the enzyme DNA polymerase links them to form a continuous new strand. This process is called semi-conservative replication because each resulting DNA molecule consists of one old (conserved) strand and one newly synthesized strand.

The Significance of Sequence

The functional information of the cell is determined by the specific sequence of the bases along a single strand. The order of A, T, C, and G constitutes the genetic code, with specific stretches of this sequence forming genes. The cell reads this long chain of letters in three-letter units called codons. Each unique codon specifies a particular amino acid, which are the building blocks of proteins. The specific sequence of codons dictates the precise order of amino acids, determining the final structure and function of a protein.