When a complete blood count (CBC) is performed, the laboratory analysis may report “atypical lymphocytes.” This descriptive term indicates that certain white blood cells look different under the microscope. The presence of these cells is not a final diagnosis; rather, it signals that the body’s immune system is vigorously responding to a challenge or threat. These activated cells are a sign of immunological activity, often associated with acute, self-limiting conditions, though they may also appear in chronic or serious diseases.
Defining Atypical Lymphocytes
A lymphocyte is a type of white blood cell central to the adaptive immune system, responsible for recognizing and targeting foreign pathogens. Normal lymphocytes are relatively small cells with a spherical nucleus that occupies most of the cell’s volume and a scant amount of cytoplasm. When the body encounters an invader, these cells rapidly activate and transform.
Atypical lymphocytes, sometimes called reactive or variant lymphocytes, are morphologically altered cells resulting from this activation. They are visibly larger than their resting counterparts and exhibit a more abundant, sometimes pale blue, cytoplasm. The nucleus may also appear irregular, indented, or lobulated, reflecting the cell’s heightened state of activity.
These changes are a visual marker of their function, as they are typically cytotoxic T-lymphocytes (CD8+) that have proliferated to combat an infection. The transformation allows them to become highly effective “killer” cells, prepared to destroy infected body cells. The term “atypical” simply describes their appearance as being outside the typical resting state, not necessarily as being inherently abnormal or malignant.
Acute Infections and Common Causes
The most frequent reason for the appearance of atypical lymphocytes is a common, acute viral infection, which triggers a robust and temporary immune response. The classic example is infectious mononucleosis (“mono”), most often caused by the Epstein-Barr Virus (EBV). The immune system’s mobilization against EBV-infected B-cells leads to a surge of reactive T-lymphocytes, which are the atypical cells observed in the blood.
In acute EBV infection, atypical lymphocytes can account for 10% or more of the total white blood cell differential count, a finding that strongly suggests mononucleosis in a patient with symptoms like fever and fatigue. Cytomegalovirus (CMV), another common herpesvirus, also frequently causes a mononucleosis-like syndrome resulting in a similar population of atypical lymphocytes. Like EBV, CMV infection is usually self-limited, but the presence of these activated cells helps distinguish the illness from bacterial causes.
Other viral pathogens known to induce this specific immune change include various Hepatitis viruses (A, B, or C) and acute Human Immunodeficiency Virus (HIV) seroconversion. During the initial stage of HIV infection, the immune system mounts a strong defense that often produces a high percentage of atypical lymphocytes, mimicking mononucleosis. Less common causes include parasitic infections like toxoplasmosis.
Non-Infectious and Chronic Conditions
While acute infections are the most common cause, atypical lymphocytes can also be a finding in non-infectious conditions or chronic diseases. Certain medications, particularly anti-seizure drugs like phenytoin and some antibiotics, can induce a hypersensitivity reaction known as Drug Reaction with Eosinophilia and Systemic Symptoms (DRESS). This severe reaction is characterized by fever, rash, organ involvement, and the presence of atypical lymphocytes in the blood.
Autoimmune disorders, where the immune system mistakenly targets the body’s own tissues, can also cause chronic immune activation. Conditions such as Systemic Lupus Erythematosus (SLE) or Rheumatoid Arthritis (RA) sometimes show a persistent atypical lymphocytosis due to ongoing inflammation and immune stimulation. This finding reflects a generalized state of immune dysregulation.
In rare instances, atypical lymphocytes may be difficult to distinguish from malignant cells associated with hematologic cancers, such as certain leukemias and lymphomas. Reactive atypical lymphocytes are typically diverse in size and shape (pleomorphism), reflecting a polyclonal immune response. In contrast, malignant lymphocytes tend to be uniform (monomorphic), indicating a clonal, uncontrolled proliferation of a single cell type, such as in Chronic Lymphocytic Leukemia (CLL). The possibility of malignancy necessitates thorough investigation when the atypical cells persist or are accompanied by other concerning blood count abnormalities.
Diagnostic Follow-up and Interpretation
The finding of atypical lymphocytes on a CBC prompts a focused diagnostic follow-up to determine the underlying cause. The first step involves correlating the laboratory result with the patient’s clinical presentation, including recent symptoms, travel history, and any new medications. A low percentage of atypical cells in an otherwise asymptomatic individual may simply be monitored, as it could be a transient finding after a minor, unnoticed infection.
If the patient is symptomatic or the percentage of atypical cells is high, specific serological tests are usually ordered to confirm or rule out the most common infectious causes, including testing for EBV and CMV antibodies, and possibly HIV testing. When malignancy is a concern, or if the lymphocytosis is persistent and unexplained, more specialized testing is required.
Flow cytometry analyzes the cell surface markers of the lymphocytes to determine if the population is polyclonal (reactive) or monoclonal (potentially malignant). This advanced analysis helps confirm whether the cells are normal immune responders or part of a lymphoproliferative disorder, guiding the final diagnosis and subsequent management plan.

