The bacterium Streptococcus pneumoniae is a microorganism frequently encountered in clinical settings, recognized as a leading cause of various serious human infections. This organism, often referred to as pneumococcus, is responsible for a spectrum of diseases, including pneumonia, middle ear infections, and life-threatening conditions like meningitis. When a potential infection arises, diagnosis involves examining a sample under a microscope to visually identify the causative agent. This microscopic examination provides immediate, though preliminary, information regarding the bacterium’s characteristics and helps guide further laboratory work.
Understanding Streptococcus Pneumoniae
Streptococcus pneumoniae is biologically classified as a coccus, meaning it has a generally spherical shape, and it is a member of the Streptococcus genus. This bacterium is non-motile and does not form spores, lacking the capacity to create a dormant, highly resistant form. It is considered a facultative anaerobe, which means it can generate energy and survive in environments both with and without oxygen.
The organism naturally resides in the human upper respiratory tract, particularly the nasopharynx, often as a commensal in healthy individuals. Carriage rates can be substantial, especially among children, who often act as reservoirs for transmission. Under certain conditions, such as a compromised immune system or a preceding viral infection, the bacterium can spread to sterile sites like the lungs, bloodstream, or meninges, causing community-acquired pneumonia and bacterial meningitis.
The Importance of Gram Staining
The process of Gram staining is the foundational technique used to prepare S. pneumoniae for microscopic observation and is a standard procedure in microbiology labs. This multi-step differential stain utilizes a sequence of dyes and washes to categorize bacteria based on the chemical and physical properties of their cell walls. The initial step involves applying crystal violet, a purple dye, which is subsequently fixed within the cell using a mordant, typically an iodine solution.
The thick layer of peptidoglycan in the S. pneumoniae cell wall resists the alcohol decolorization step. This structural difference prevents the crystal violet-iodine complex from being rinsed out. Consequently, when the final counterstain, safranin (a red dye), is applied, it cannot displace the primary purple stain. For this reason, Streptococcus pneumoniae is classified as Gram-positive and appears characteristically purple or dark blue under the light microscope.
Distinctive Microscopic Features
Once stained, the visual presentation of Streptococcus pneumoniae under high magnification is highly distinctive and helps differentiate it from many other bacterial species. The cells are cocci, but they are not perfectly round; they exhibit a slightly elongated or oval shape. This unique morphology is often described as lancet-shaped, resembling a small spearhead.
The most common arrangement for this organism is in pairs, a configuration known as diplococci. These pairs often align end-to-end. Occasionally, the cells may also be seen in very short chains, though the diplococci formation is the most typical arrangement observed in patient samples. The size of the individual cocci typically ranges from 0.5 to 1.25 micrometers in diameter.
The bacterium’s polysaccharide capsule is a layer of sugar molecules surrounding the cell wall. This capsule serves as a primary virulence factor, protecting the bacteria from phagocytosis by host immune cells. Under a standard Gram stain, the capsule does not take up the dye and appears as a clear, unstained halo surrounding the dark purple bacterial cell itself. Techniques like the Quellung reaction can further enhance the visibility of this clear zone, providing definitive visual confirmation of the encapsulated state.
Confirmatory Laboratory Tests
While the Gram stain provides a rapid presumptive identification based on color and shape, morphology alone is often insufficient for a conclusive diagnosis, as other alpha-hemolytic streptococci can look similar. Therefore, microscopic findings are typically followed by specific biochemical tests to confirm the identity of S. pneumoniae. Two primary tests are used to differentiate pneumococci from other closely related bacteria.
Optochin Sensitivity Test
This test utilizes Optochin (ethylhydrocupreine hydrochloride), a chemical agent that selectively inhibits the growth of S. pneumoniae. When a disk impregnated with Optochin is placed on a culture plate, a clear zone of no growth, or a zone of inhibition, indicates sensitivity. This positive result is a strong indicator for S. pneumoniae, since most other alpha-hemolytic streptococci are resistant.
Bile Solubility Test
This test exploits a unique characteristic of the pneumococcal cell wall. It involves exposing the bacterial colony to bile salts, such as sodium deoxycholate. Streptococcus pneumoniae produces an autolytic enzyme activated by bile salts, leading to the rapid dissolution (lysis) of the bacterial cells. A positive result is the physical clearing of the cloudy bacterial suspension, confirming the organism is bile soluble.

