Magnetic Resonance Imaging-Proton Density Fat Fraction (MRI-PDFF) is a specialized, non-invasive imaging technique designed to quantitatively measure fat content, most commonly in the liver. This method uses a modified MRI sequence to generate a numerical value, the Proton Density Fat Fraction (PDFF). PDFF is expressed as a percentage, representing the concentration of fat protons relative to the total protons (fat and water) in the scanned area. MRI-PDFF is a reliable and reproducible biomarker, offering a significant advantage by providing a whole-organ assessment of fat accumulation without invasive procedures.
The Science Behind the Measurement
The core principle behind MRI-PDFF is the “chemical shift” phenomenon. This refers to the slight difference in magnetic resonance frequency between protons in water and protons in fat molecules (triglycerides). This frequency difference allows specialized magnetic resonance sequences to distinguish between the two signal sources. By acquiring multiple echoes at various time points after the radiofrequency pulse, the signal from water and fat oscillates in a predictable way.
Advanced software algorithms use this multi-echo data to mathematically separate the fat signal from the water signal. The algorithms also correct for distorting factors such as magnetic field variations or signal decay caused by iron accumulation. The final calculation generates a Proton Density Fat Fraction (PDFF) map. In this map, each point, or voxel, is assigned a percentage value representing the density of fat protons relative to the total proton density. This complex chemical shift-encoded MRI (CSE-MRI) technique provides accurate fat quantification across the full range (0% to 100%).
Primary Application in Liver Health
The most relevant application of MRI-PDFF is the diagnosis and monitoring of hepatic steatosis, now often called Metabolic Dysfunction-Associated Steatotic Liver Disease (MASLD). This quantitative measurement assesses the severity of fat accumulation, which is the foundational feature of MASLD and its progressive form, Metabolic Dysfunction-Associated Steatohepatitis (MASH). Precise quantification of liver fat is necessary because the amount of fat influences the risk of disease progression to fibrosis, cirrhosis, and liver cancer.
MRI-PDFF allows clinicians to accurately stage the disease and track changes over time. In clinical trials, a quantifiable reduction in the PDFF score is frequently used as an objective measure of treatment effectiveness for new drug therapies. Studies have demonstrated that a relative reduction of approximately 30% in the MRI-PDFF value from baseline is associated with a beneficial histological response in MASH patients. The ability to monitor these small, but significant, changes non-invasively makes MRI-PDFF an important tool for managing the global epidemic of fatty liver disease.
Benefits Over Traditional Diagnostics
MRI-PDFF offers significant advantages over older methods for assessing liver fat accumulation. Liver biopsy, while long considered the definitive standard, is an invasive procedure that carries risks and is subject to sampling error because it analyzes only a tiny portion of the liver. In contrast, MRI-PDFF is entirely non-invasive and measures fat content across the entire liver volume, better accounting for the often non-uniform distribution of fat.
Compared to conventional imaging, MRI-PDFF provides greater accuracy and reproducibility. Standard ultrasound and computed tomography (CT) scans are limited in detecting and quantifying lower levels of fat accumulation, often requiring at least 30% fat infiltration for reliable diagnosis. CT scans also involve exposure to ionizing radiation, which MRI-PDFF avoids entirely. The quantitative PDFF score allows for highly consistent and repeatable measurements, enabling accurate comparison of results over long periods of time and across different centers.
Interpreting the PDFF Score
The MRI-PDFF measurement is a single percentage representing the average fat content in the liver, ranging theoretically from 0% to 100%. A healthy liver typically exhibits a PDFF score below 5% to 6%. Scores above this threshold indicate the presence of steatosis, or fatty liver.
Clinical guidelines use specific cutoffs to categorize the severity of steatosis for diagnosis and treatment planning:
Mild steatosis: 6% to 17%
Moderate steatosis: 17% to 22%
Severe steatosis: Greater than 22%
This quantifiable score provides the clinician with an objective, continuous measure of disease severity that can be tracked with precision following lifestyle changes or medical interventions.

