What Is Parsimony in Biology and How Is It Used?

The principle of parsimony guides the selection of the most plausible explanation from a set of competing hypotheses. It suggests that when multiple theories equally account for observed data, the simplest one should be preferred. In practice, scientists favor the hypothesis that introduces the fewest new assumptions, entities, or steps to explain a phenomenon. This preference for economy promotes clarity and testability.

The Principle of Simplicity in Science

The principle of parsimony is summarized by the idea that “entities must not be multiplied beyond necessity.” This concept guides model building, encouraging scientists to construct theories that are as straightforward as possible without sacrificing explanatory power. When two hypotheses make the exact same predictions, the one that relies on fewer unsupported assumptions is viewed as a stronger starting point for investigation.

Simplicity is valued because it directly relates to a hypothesis’s testability and efficiency. A less complex theory is easier to subject to empirical testing, as it presents a clearer set of predictions that can be proven false. Simpler models are also less susceptible to overfitting, where a complex model might incorporate noise or random errors as meaningful patterns. By minimizing complexity, scientists aim for models that are more robust and more likely to reflect the underlying reality of a system.

Where Parsimony is Used in Biology

Parsimony is used in the field of phylogenetics, which is the study of evolutionary relationships among groups of organisms. Scientists use this principle to reconstruct the evolutionary history of species and determine how they are related through common ancestry, typically represented in a phylogenetic tree. The goal is to determine the sequence of evolutionary events that most efficiently explains the distribution of traits among a set of species.

To build these trees, researchers analyze characteristics, known as “character states,” such as physical traits or molecular data like specific DNA sequences. For any given set of species, numerous possible tree structures could connect them. Parsimony serves as the criterion for choosing among these possibilities by favoring the tree that requires the minimum number of evolutionary changes to account for the observed character states. This framework assumes that an evolutionary event, such as a genetic mutation or the gain of a physical trait, is less likely to have occurred multiple times independently than a single time in a common ancestor.

Scoring and Selecting the Shortest Tree

The application of parsimony in phylogenetics involves scoring different tree topologies. For each possible tree structure, scientists map the character states onto the branches, calculating the total number of evolutionary changes, or “steps,” required to explain the data. A step represents a transition from one character state to another, such as a change in a DNA sequence.

The tree that yields the lowest total score—the one requiring the fewest steps—is identified as the “shortest tree” or the most parsimonious hypothesis. This score reflects the minimum amount of evolutionary change necessary to explain the data set, minimizing the need to invoke independent evolutionary events. Evolutionary events that appear more than once, such as the independent gain of a trait in separate lineages, are referred to as homoplasy, and the parsimony method seeks to minimize the number of these events. For simple problems with a small number of species, all possible trees can be scored, but for large datasets, computer algorithms are necessary to search for the optimal score.