Trypan blue is a synthetic organic compound used in biology and medicine to differentiate between living and non-living cells or tissues. This dark blue dye was originally named for its ability to kill trypanosomes, the parasites responsible for sleeping sickness. It functions as a vital stain, selectively coloring dead or compromised cells blue while leaving healthy cells unstained. This characteristic makes it an invaluable tool in laboratory research for assessing cell health and in clinical settings for surgical visualization.
Chemical Identity and Staining Mechanism
Trypan Blue is classified chemically as a diazo dye, a type of synthetic colorant derived from toluidine. Its large molecular size, approximately 960 Daltons, and negative electrical charge are fundamental to its staining behavior at the cellular level. These properties prevent the dye from easily crossing the intact cell membrane of a healthy, viable cell.
The mechanism by which Trypan Blue operates is known as the dye exclusion principle. Living cells possess a functional, undamaged plasma membrane that acts as a selective barrier, actively excluding the large, charged dye molecule. In contrast, cells that are dead or dying have severely compromised cell membranes. This loss of integrity allows the Trypan Blue molecules to penetrate the cell’s interior freely, where the dye binds strongly to intracellular proteins. This binding results in the distinct blue coloration of the non-viable cell, making the ability to exclude the dye a direct indicator of cell viability.
Determining Cell Viability in Research
One of the most widespread laboratory uses for Trypan Blue is determining cell viability in cell culture experiments. Researchers regularly use the dye exclusion assay to calculate the percentage of live cells in a suspension, which assesses cell health.
The process involves mixing the cell suspension with a diluted Trypan Blue solution, typically at a 1:1 ratio. This mixture is then applied to a hemocytometer or loaded into an automated cell counter. Under a light microscope, cells that appear clear are counted as viable because they excluded the dye. Conversely, cells that have taken up the dye and appear blue are counted as non-viable. This visual distinction allows for a quantitative assessment of cell viability, expressed as a percentage of the total cell population.
Applications in Surgery and Medicine
The dye’s ability to selectively stain compromised or transparent tissue has led to applications in surgical fields, particularly ophthalmology. Trypan Blue is frequently used by surgeons as a surgical aid to enhance the visualization of delicate structures during cataract surgery.
Specifically, it stains the anterior lens capsule, a thin membrane that must be incised to remove the clouded lens. In cases of mature cataracts, the lack of contrast makes this capsule difficult to see, increasing the risk of complications. Applying the dye highlights the capsule, allowing the surgeon to perform the capsulorrhexis, or circular opening, with greater precision.
Trypan Blue is also used during vitreoretinal procedures to stain and delineate membranes, such as the internal limiting membrane and epiretinal membranes, on the retina’s surface. This staining makes the membranes easier to peel away. For these clinical applications, the dye is used in a diluted, sterile injectable form, topically applied to the target tissue and then rinsed away.
Safety Profile and Handling
Trypan Blue is considered safe for topical application in the clinical setting, and the Food and Drug Administration (FDA) has approved its use as a surgical aid in ophthalmology. This approval is based on its use in highly diluted concentrations and application to specific tissues, with any excess dye immediately removed. Systemic absorption is minimal in these controlled environments.
In laboratory settings, however, the dry powder form and concentrated solutions require careful handling due to potential toxicity concerns. Trypan Blue is classified as a suspected carcinogen and is considered an experimental teratogen in animal studies, necessitating adherence to strict laboratory safety protocols. Workers must use standard personal protective equipment, including gloves, lab coats, and eye protection, to prevent skin and eye contact or inhalation.

