Which STDs Are Tested by Urine?

Urine testing has significantly improved access to screening for sexually transmitted infections (STIs) by offering a simple, non-invasive method. This approach eliminates the need for more invasive or uncomfortable procedures, such as urethral or cervical swabs, which were traditionally required for diagnosis. The convenience of providing a urine sample has encouraged more people to undergo regular screening, which is a major factor in controlling the spread of certain infections. Utilizing urine allows for a less intimidating and more private testing experience.

Specific STDs Detected by Urine Samples

Urine testing is primarily used to detect the two most common bacterial STIs: Chlamydia trachomatis and Neisseria gonorrhoeae (chlamydia and gonorrhea). These infections are particularly well-suited for urine detection because they are mucosal infections affecting the urogenital tract. The bacteria colonize the cells lining the urethra in men and the urethra and cervix in women, and these infected cells are shed with the first portion of urine passed. While a vaginal swab is generally preferred for asymptomatic women, urine testing remains a widely accepted and convenient alternative for diagnosis. Some labs can also use urine to test for Trichomonas vaginalis, though its detection sensitivity is often higher with a vaginal or urethral swab.

The Technology Behind Urine Screening

Nucleic Acid Amplification Test (NAAT)

The effectiveness of urine testing for Chlamydia and Gonorrhea relies on the sophisticated Nucleic Acid Amplification Test (NAAT). NAATs detect minute genetic traces (DNA or RNA) of the pathogen, rather than requiring whole, living bacteria. The test works by targeting and making millions of copies of the organism’s nucleic acid, a process called amplification. This amplification increases the concentration of the genetic material to a detectable level, making NAAT highly sensitive and specific. Because NAAT detects genetic material, the test is not affected by delays in transport or storage time, making NAAT the current gold standard for screening these specific urogenital infections.

Preparation and Sample Collection

Proper sample collection is necessary to ensure the high accuracy of NAAT technology. Patients must provide a “first-catch” or “first-void” urine sample, which is the initial stream passed. The first 10 to 20 milliliters contain the highest concentration of epithelial cells and discharge shed from the urethra. Collecting only this initial portion is crucial, as a larger volume would dilute the sample and reduce the test’s sensitivity.

To maximize the concentration of bacteria and infected cells within the urethra, patients are advised not to urinate for a minimum of one to two hours before collection. This period allows bacteria-laden discharge to accumulate in the lower urinary tract. Unlike testing for a urinary tract infection (UTI), which requires a midstream clean-catch sample, the goal for STI screening is to capture the very first flush of the urethra. Patients should follow specific lab instructions, including not cleansing the genital area before collection, to avoid washing away the target organisms.

STDs That Require Alternative Testing

Urine testing is not a comprehensive screening tool for all STIs, as many pathogens do not colonize the urethra or shed sufficient genetic material into the urine for reliable detection. Viral infections like Human Immunodeficiency Virus (HIV) and Hepatitis B and C are systemic, circulating in the bloodstream rather than the urogenital lining. These systemic infections require a blood test to detect the virus itself or the antibodies the body produces in response to the infection. Similarly, Syphilis, caused by the bacterium Treponema pallidum, is also typically detected through a blood test screening for specific antibodies. Herpes Simplex Virus (HSV) is generally diagnosed by swabbing an active lesion or sore, although blood tests can also detect the presence of antibodies to the virus.