Why Do Koalas Have Chlamydia and Why Are They So Vulnerable?

The koala, an iconic Australian marsupial, faces an existential threat driven by an epidemic of Chlamydia infection. This widespread bacterial disease is a primary factor in the dramatic decline of koala populations across the continent. Koalas are uniquely vulnerable, suffering debilitating symptoms that severely impact their survival and reproductive capacity.

The Specific Chlamydia Strains and Disease Manifestation

The devastating disease known as chlamydiosis in koalas is primarily caused by the bacterium Chlamydia pecorum, though Chlamydia pneumoniae is also sometimes detected. C. pecorum is the more prevalent and pathogenic strain, leading to severe physical outcomes. The infection is an obligate intracellular bacteria, meaning it must invade a host cell to replicate.

One visible sign of advanced infection is keratoconjunctivitis, the inflammation of the tissues around the eyes that can lead to scarring and irreversible blindness. The infection also targets the urinary system, causing cystitis, a painful inflammation of the bladder. This often results in the clinical sign known as “wet bottom,” where constant urine leakage causes fur staining and skin ulceration around the koala’s rump.

The most severe long-term impact occurs in the reproductive tract. In female koalas, the infection causes inflammation and scarring, including the formation of cysts on the ovaries. This internal damage leads to permanent female infertility, removing the individual from the breeding population. Male koalas can develop infections in their prostate and bulbourethral glands, leading to male infertility and making their reproductive tracts a reservoir for the bacteria.

Transmission Pathways in Koala Populations

The movement of Chlamydia occurs primarily via direct contact, with sexual transmission being the dominant route among adult koalas. Infected males carry the bacteria in their reproductive tracts and transmit it during mating to uninfected females. This venereal spread efficiently distributes the bacteria within the sexually active population.

Transmission also occurs from mother to joey, known as vertical transmission, during the joey’s early development. This happens when the joey passes the mother’s cloaca during birth or while residing in the pouch. Another route is through pap feeding, where the joey consumes a specialized form of the mother’s feces to inoculate its gut with microbes necessary for digesting eucalyptus leaves.

Environmental spread is a potential pathway, though less understood than direct contact routes. The bacteria can be shed through infected discharges from the eyes and urogenital tract. Contaminated surfaces or water sources in areas of high koala density may contribute to the spread of the infection.

Unique Biological Factors Driving Koala Vulnerability

The koala’s specific biological makeup and ecological pressures combine to make it exceptionally vulnerable to severe chlamydiosis. A key factor is the koala’s immune response, which often fails to effectively clear the C. pecorum infection. The immune system’s attempt to fight the infection results in an over-reactive inflammatory response. This response causes severe, scarring damage to the eyes and reproductive organs instead of successfully eliminating the pathogen.

The Major Histocompatibility Complex (MHC) genes, which are responsible for recognizing pathogens, also play a role in disease susceptibility. Studies have identified specific MHC alleles that increase a koala’s likelihood of progressing from an asymptomatic infection to clinical disease. This suggests that genetic variation within the population influences the ability to resist the debilitating effects of the bacteria.

A compounding threat is the Koala Retrovirus (KoRV), which is endemic in many northern koala populations and functions similarly to an AIDS-like virus. KoRV weakens the koala’s immune system, making them more susceptible to contracting Chlamydia and increasing the severity of the resulting disease. This synergistic relationship means the retrovirus exacerbates chlamydiosis symptoms, leading to higher rates of cystitis and conjunctivitis.

Environmental and social stress further weakens the koala’s defenses, leading to suppressed immunity. Factors like habitat loss, fragmentation, and overcrowding elevate stress hormones, such as cortisol. This physiological stress can lead to the reactivation of latent infections or increase susceptibility to new ones, turning a subclinical infection into a full-blown disease.

Conservation Efforts and Disease Management

Managing chlamydiosis in koalas involves a combination of direct treatment and long-term preventative strategies. For koalas rescued and admitted to wildlife hospitals, antibiotic treatment is the frontline defense against active infection. However, this approach carries a significant risk because koalas have a highly specialized gut microbiome necessary to detoxify and digest their exclusive diet of eucalyptus leaves.

The use of broad-spectrum antibiotics can disrupt this gut bacteria, leading to digestive issues and, in severe cases, starvation. Because of this complication, treatment periods are often extended and require intensive captive care, which adds a layer of complexity to rehabilitation. The high mortality rate associated with severe cases and the risk of infertility even after successful treatment mean that a long-term solution is necessary.

The most promising long-term strategy is the development and deployment of a Chlamydia vaccine. Researchers have developed a single-dose vaccine targeting the major outer membrane protein of C. pecorum. This vaccine has shown success in reducing the progression of the disease and decreasing mortality rates in wild populations. The vaccine is being used in wildlife hospitals to protect koalas before their release. The goal is to stimulate an immune response that prevents the infection from progressing to the debilitating clinical stage. Modelling suggests that achieving a high vaccination rate can shift a koala population’s trajectory away from extinction toward a more stable state.