It is common to suffer from digestive distress after eating foods like onions and garlic, which are widely considered healthy staples. Despite their flavor and nutritional benefits, these ingredients can trigger uncomfortable symptoms such as bloating, gas, and abdominal pain in many people. This reaction is not a true food allergy, but rather a sensitivity to specific types of carbohydrates present in these vegetables. Understanding the chemical structure of these compounds explains the discomfort and helps pave the way for effective dietary management.
The Role of Fructans and FODMAPs
The primary culprits in onions and garlic are specialized carbohydrates called fructans. Fructans are chains of fructose molecules linked together in a way that the human small intestine cannot easily break down or absorb. This inability is universal because people lack the necessary enzymes to digest these bonds efficiently in the upper digestive tract.
Fructans fall under the larger umbrella of Fermentable Oligosaccharides, Disaccharides, Monosaccharides, and Polyols, collectively known as FODMAPs. Onions and garlic are particularly concentrated sources of fructans, with garlic having an especially high content. Since only a small percentage of these molecules are absorbed, the majority of fructans continue their journey largely intact, meaning even a small serving can deliver a significant load of these undigested sugars.
How Undigested Sugars Cause Symptoms
The poorly absorbed fructans travel from the small intestine into the large intestine, or colon, where a massive community of gut bacteria resides. These bacteria view the undigested fructans as a readily available food source. They rapidly begin to break down, or ferment, these carbohydrates.
The fermentation process is what generates the characteristic digestive upset. As the bacteria metabolize the fructans, they release various gases, primarily hydrogen, methane, and carbon dioxide. This rapid production of gas causes the intestinal walls to stretch, leading directly to the sensation of bloating, distention, and painful cramping.
These undigested sugars also create an osmotic effect. Fructans are osmotically active, meaning they draw water into the intestinal tract as they pass through. This influx of extra water increases the volume of the bowel contents. The combination of excess gas and fluid contributes to altered bowel movements, frequently resulting in diarrhea or urgency.
Practical Dietary Adjustments
Managing a sensitivity to onions and garlic begins with identifying your personal tolerance level. Since the reaction is dose-dependent, some individuals may tolerate a small amount of onion or garlic, while others may react to even trace quantities. It can be helpful to temporarily eliminate high-fructan foods and then reintroduce them one at a time to find your specific threshold, ideally with the guidance of a dietitian.
The low-FODMAP elimination diet is a structured, temporary approach often used to pinpoint specific triggers like fructans. This diet involves removing all high-FODMAP foods for a period, followed by a systematic reintroduction phase to determine which category causes symptoms. For those who cannot tolerate the raw ingredients, cooking methods offer a way to gain flavor without the digestive distress.
Fructans are water-soluble, meaning they easily leach out of the vegetable and into any liquid they are cooked in, such as soups or sauces. However, fructans are not fat-soluble, which is why garlic-infused oils are often tolerated. The flavoring compounds dissolve into the oil, while the fructans remain in the solid clove, which is then removed before consumption. If symptoms persist despite these adjustments, consulting a healthcare professional is advisable, as persistent distress may signal an underlying condition like Irritable Bowel Syndrome (IBS).

